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    kPWorkbench: A software suit for membrane systems

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    Publication date
    2020
    Author
    Konur, Savas
    Mierla, L.M.
    Ipate, F.
    Gheorghe, Marian
    Keyword
    Membrane computing
    Modelling
    Simulation
    Agent-based simulation
    Verification
    Synthetic biology
    Rights
    (c) 2020 The Authors. This is an Open Access article distributed under the Creative Commons CC-BY-NC-ND license (http://creativecommons.org/licenses/by-nc-nd/4.0/)
    Peer-Reviewed
    Yes
    
    Metadata
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    Abstract
    Membrane computing is a new natural computing paradigm inspired by the functioning and structure of biological cells, and has been successfully applied to many different areas, from biology to engineering. In this paper, we present kPWorkbench, a software framework developed to support membrane computing and its applications. kPWorkbench offers unique features, including modelling, simulation, agent-based high performance simulation and verification, which allow modelling and computational analysis of membrane systems. The kPWorkbench formal verification component provides the opportunity to analyse the behaviour of a model and validate that important system requirements are met and certain behaviours are observed. The platform also features a property language based on natural language statements to facilitate property specification.
    URI
    http://hdl.handle.net/10454/18044
    Version
    Published version
    Citation
    Konur S, Mierla L, Ipate F et al (2020) kPWorkbench: A software suit for membrane systems. SoftwareX. 11: 100407.
    Link to publisher’s version
    https://doi.org/10.1016/j.softx.2020.100407
    Type
    Article
    Collections
    Engineering and Informatics Publications

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